BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B11SP1|AL425819
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1734 1550 0.0
>3x_Contig1734
Length = 17938
Score = 1550 bits (782), Expect = 0.0
Identities = 801/805 (99%), Gaps = 3/805 (0%)
Strand = Plus / Plus
Query: 1 gatcttgaaggtggttcaagactatgcaaagaagtcgaagattttgaaaccctaagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7522 gatcttgaaggtggttcaagactatgcaaagaagtcgaagattttgaaaccctaagagca 7581
Query: 61 ggtgcccttggtgagtcgataattggagtaggtgacttgtttgggaaatattgcggacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7582 ggtgcccttggtgagtcgataattggagtaggtgacttgtttgggaaatattgcggacat 7641
Query: 121 acgaacgaatgtgcacttaactcgtccgcagaagctcttttatccatatccacctcgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7642 acgaacgaatgtgcacttaactcgtccgcagaagctcttttatccatatccacctcgaaa 7701
Query: 181 catttctccaaaaacgaccaaaattgtttatatttatcatctttggacatatcctcatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7702 catttctccaaaaacgaccaaaattgtttatatttatcatctttggacatatcctcatcc 7761
Query: 241 atgtaataatcactattggcgatatattccatagtttccgcgtcagtttcacaatcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7762 atgtaataatcactattggcgatatattccatagtttccgcgtcagtttcacaatcaaac 7821
Query: 301 ggcatatacccacatagaccatgaaataacatagaacaccgagagcccacacgtctacac 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7822 ggcatatacccacat--gccatgaaataacatagaacaccgagagcccacacgtctacac 7879
Query: 361 ctgtcccatatggttttaacctaccattctggatactagactgtttaccactattcttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7880 ctgtcccatatggttttaacctaccattctggatactagactgtttaccactattcttac 7939
Query: 421 aggccacgagttccggagccaaatatgagattgttccgacaaactctttactaccagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7940 aggccacgagttccggagccaaatatgagattgttccgacaaactctttactaccagttt 7999
Query: 481 ccgtacttatagccaaaccaaaatctgccaaaatcaaatcgtgagccgatttatcgtaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8000 ccgtacttatagccaaaccaaaatctgccaaaatcaaatcgtgagccgatttatcgtaca 8059
Query: 541 tagcatcatccctaggtaatatcaatcatgttcgtcttggtcttcaacctaaagagaacg 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 8060 tagcatcatccctaggtaat-tcaatcatgttcgtcttggtcttcaacctaaagagaacg 8118
Query: 601 ttttcagccttaagatcacgatgaatgatcccattaccgtgcaaaaattgcaaagcactc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8119 ttttcagccttaagatcacgatgaatgatcccattaccgtgcaaaaattgcaaagcactc 8178
Query: 661 aacaagcacgcagtaaacggtttcacttgagtctctagatccaaatgacccgcatttaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8179 aacaagcacgcagtaaacggtttcacttgagtctctagatccaaatgacccgcatttaaa 8238
Query: 721 atcttatcgtacaaatcctccgactcacatagctgcgtcaccaaaacgatactcttcgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8239 atcttatcgtacaaatcctccgactcacatagctgcgtcaccaaaacgatactcttcgaa 8298
Query: 781 gtctcaaagaaatcgaatagttgca 805
|||||||||||||||||||||||||
Sbjct: 8299 gtctcaaagaaatcgaatagttgca 8323
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5083
Number of Sequences: 1807
Number of extensions: 5083
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)